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2011 • Journal Article

Fast computation of minimal elementary decompositions of metabolic flux vectors

Authors:
Jungers, Raphaël M. , Zamorano, Francisca, Blondel, Vincent , Vande Wouwer, Alain, Bastin, Georges
Published in:
Automatica

Volume: 47 • Number: 6 • Pages: 1255-1259

The concept of elementary flux vector is valuable in a number of applications of metabolic engineering. For instance, in metabolic flux analysis, each admissible flux vector can be expressed as a non-negative linear combination of a small number of elementary flux vectors. However a critical issue concerns the total number of elementary flux vectors which may be huge because it combinatorially increases with the size of the metabolic network. In this paper we present a fast algorithm that randomly computes a decomposition of admissible flux vectors in a minimal number of elementary flux vectors without explicitly enumerating all of them.

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